Plant Genomics 2019

Vols 1 and 2 contain 57 papers in the Special Issue of ‘Plant Genomics 2009’ and cover a wide range of topics, highlighting the significant progress that has been made in recent years in our understanding of the genetics and genomics of plants’ growth, development, and stress responses. These studie...

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Bibliographic Details
Format:	Online
Language:	English
Published:	MDPI - Multidisciplinary Digital Publishing Institute 2023
Subjects:	Aristolochia chloroplast genome molecular evolution compare analysis phylogeny brassinosteroid-signaling kinase gene family expression profile alternative splicing intron retention genome-wide analysis drought tolerance foxtail millet LIM genes transgenic rice protein phosphatase (PP2C) cotton syntenic relationships expression patterns evolutionary analysis Populus trichocarpa multiple organellar RNA editing factor drought stress RNA editing genome β-glucosidase Brassica rapa BrBGLU10 pollen development co-expression analysis VQ genes family Eucalyptus grandis expression pattern plant hormones abiotic stress calcium-dependent protein kinases CDPK-related kinases cucurbitaceae hst1 Na+ accumulation SNP rapid generation advance salt tolerant variant annotation whole-genome sequencing expression genome-wide identification of peroxidase genes duplication pattern stress cassava ABCDE model cereals evolutionary relationships flower organ identity floral speciation MADS-box genes maize ZmTCP natural variation subgroup IId CsWRKY7 flowering Arabidopsis Camellia sinensis pomegranate sequence diversity site-specific selection tomato MADS-box floral organ fruit development polygalacturonase (PGs), pectin methylesterase (PMEs), collinearity analysis gene duplications expression profiling grapevine Rehmannia glutinosa L. replant disease rhizosphere microbes NB-LRR plant hormone apple aquaporin functional analysis stress tolerance Salicaceae phylogenetic relationship plastid genome comparative genomics repeat sequences stress marker genes sesame gene co-expression abiotic stress tolerance hub genes meta-analysis agrobacterium transient expression virus-induced gene silencing (VIGS) tobacco rattle virus (TRV) cassava (Manihot esculenta) chalcone synthase chromatin accessibility epigenetic inheritance genetic engineering methylation ODNs CRISPR/Cas9 genome editing plant breeding multiplex genome editing crop improvement TALEN ZFN biotic stress avocado carotenoid biosynthesis mesocarp seed de novo assembly from short read sequencing full-length transcript sequencing differentially expressed genes gene dosage pigment turnip gene expression antioxidant nutritional quality B3 superfamily transcription factor ovule abortion Vitis vinifera expression analysis cold response Pittosporum tobira leaf variegation linoleic acid ROS scavenging enzyme heat shock protein invasive weed Rhizoctonia solani phytohormone signaling systemic signal plant defense calcium signaling ABA drought salinity citrulline genome-wide association study haplotype watermelon acetolactate synthase ferrochelatase rice large grain gene large grain-isogenic Koshihikari fine mapping NGS GW2 co-integration gene recombination semidwarf gene d60 linkage chromosome 2 Brachypodium comparative chromosome barcoding dysploidy karyotype structure and evolution model grass genus molecular cytogenetics polyploidy plant genome artificial microRNA gene silencing Lagerstroemia indica ornamental value anthocyanins leaf coloration directional improvement YABBY pineapple subcellular localization oak species identification Quercus mutation hotspots Centranthera grandiflora Benth transcriptome catalpol biosynthesis acteoside biosynthesis azafrin biosynthesis wheat Dasypyrum villosum alien substitution line GISH molecular marker marker-assisted selection regulation RNA-seq biosynthesis pathway chalcones stilbenes common bean Fusarium oxysproum plant–pathogen interaction metabolome evolution genome fractionation ABC transporters transcription factors transposable elements whole-genome duplication RNA-sequencing ChIP-sequencing transcriptional regulatory mechanism data integration karyopherin solanum tuberosum chemical fungicide disease control Neoscytalidium dimidiatum royal poinciana stem canker UAE bioinformatics VvGAST GASR Cis-elements wheat genome kernel hardness Puroindoline Puroindoline b-2 variants genotype-to-phenotype association synteny phylogenetic analysis genomic selection missing data minor allele frequency GDSL lipase GPAT6 cutin habaneros Capsicum chinense fruit RNA-Seq flax genome-wide association study (GWAS) single nucleotide polymorphism (SNP) prediction accuracy quantitative trait loci (QTL) quantitative trait nucleotides (QTNs) Fabaceae Lupinus glutamine synthetase (GS) phosphoenolpyruvate carboxylase (PEPC) gene families duplication/triplication structural genomics genome organization genome evolution microRNA miRNA156 seed development fatty acid synthesis linseed flax anthocyanin biosynthetic genes cis-regulatory motifs DEGs network analysis qRT-PCR reddish purple Chinese cabbage abscisic acid flavonolignans metabolite profiling Silybum marianum silymarin aquaporins bright yellow-2 suspension cells Nicotiana tabacum substrate specificity TaCKX1 TaCKX expression grain yield cytokinins phytohormones RNAi wheat spikes genome-wide identification 2OGD family hormone biosynthetic and metabolism genes tomato fruit ripening DNA methylation phenomics thema EDItEUR::Q Philosophy and Religion::QD Philosophy
Online Access:	ONIX_20230714_9783036580883_120
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Summary:	Vols 1 and 2 contain 57 papers in the Special Issue of ‘Plant Genomics 2009’ and cover a wide range of topics, highlighting the significant progress that has been made in recent years in our understanding of the genetics and genomics of plants’ growth, development, and stress responses. These studies provide valuable insights into the potential applications of genomic tools and technologies for crop improvement and sustainable agriculture, as well as fundamental questions about the evolution and function of plant genes and genomes.

Plant Genomics 2019

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